Overview
The Firmicutes (: firmus, strong, and cutis, skin, referring to the cell wall) are a phylum of bacteria, most of which have Gram-positive cell wall structure.1] A few, the Mollicutes or mycoplasmas, lack cell walls altogether and so do not respond to Gram staining, but still lack the second membrane found in other Gram-negative forms. Others, such as Megasphaera, Pectinatus, Selenomonas, and Zymophilus, have a porous pseudo-outer-membrane that causes them to stain Gram-negative. Scientists once classified the Firmicutes to include all Gram-positive bacteria, but have recently defined them to be of a core group of related forms called the low-G+C group, in contrast to the Actinobacteria. They have round cells, called cocci (singular coccus), or rod-shaped forms.
Many Firmicutes produce endospores, which are resistant to desiccation and can survive extreme conditions. They are found in various environments, and the group includes some notable pathogens. Those in one family, the heliobacteria, produce energy through photosynthesis. Firmicutes play an important role in beer, wine, and cider spoilage.
Classes
The group is typically divided into the Clostridia, which are anaerobic, the Bacilli, which are obligate or facultative aerobes, and the Mollicutes.
On phylogenetic trees, the first two groups show up as paraphyletic or polyphyletic, as do their main genera, Clostridium and Bacillus.[2]
It is likely these groups will undergo revision.
Genera
While there are currently more than 274 genera within the Firmicutes phylum, notable genera of Firmicutes include:
Bacilli, order Bacillales
- Bacillus
- Listeria
- Staphylococcus
Bacilli, order Lactobacillales
- Enterococcus
- Lactobacillus
- Lactococcus
- Leuconostoc
- Pediococcus
- Streptococcus
Clostridia
- Acetobacterium
- Clostridium
- Eubacterium
- Heliobacterium
- Heliospirillum
- Megasphaera
- Pectinatus
- Selenomonas
- Zymophilus
- Sporomusa
Mollicutes
- Mycoplasma
- Spiroplasma
- Ureaplasma
- Erysipelothrix
Health Implications
The division Firmicutes as part of the gut flora has been shown to be involved in energy resorption and obesity.[3][4][5]
Laboratory Detection
While there has up to this point in time not been a way to categorically define a given bacterium as belonging to Firmicutes, as the phylum is highly diverse in phenotypic characteristics due to promiscuous plasmid exchange across species and genera of this phyla, the presence of Firmicutes can now be detected by real-time PCR using the meth odologies recently described.[6]
Photos
Taxonomy
The Phylum Firmicutes is further organized into finer groupings including:
- Class (3): Bacilli · Clostridia · Mollicutes
- Species: ZipcodeZoo has pages for 3,420 species and subspecies in the Phylum Firmicutes.
Classes
Bacilli
Clostridia
The Clostridia are a class of , including Clostridium and other similar genera. They are distinguished from the Bacilli by lacking aerobic respiration. Studies show they are not a monophyletic group, and their relationships are not entirely certain. Currently most are placed in a single order called Clostridiales, but this is not a natural group and is likely to be redefined in the future. [more]
Mollicutes
The Mollicutes are a class of distinguished by the absence of a cell wall. They are primarily parasites of various animals and plants, living within the host's cells. Individuals are very small, typically only 0.2-0.3 µm in size and have a very small genome size. They vary in form, although most have sterols that make the cell membrane somewhat more rigid. Many are able to move about through gliding, but members of the genus Spiroplasma are helical and move by twisting. The best-known genus in Mollicutes is Mycoplasma. [more]
At least 242 species and subspecies belong to the Class Mollicutes.
More info about the Class Mollicutes may be found here.
References
- ^ Firmicutes at Dorland's Medical Dictionary
- ^ Wolf M, Müller T, Dandekar T, Pollack JD (May 2004). "Phylogeny of Firmicutes with special reference to Mycoplasma (Mollicutes) as inferred from phosphoglycer ate kinase amino acid sequence data". Int. J. Syst. Evol. Microbiol. 54 (Pt 3): 871–5. PMID 15143038. http://ijs.sgmjournals.org/cgi/pmidlookup?view=long&pmid=15143038.
- ^ Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Microbial ecology: human gut microbes associated with obesity. Nature. 2006 Dec 21;444(7122):1022-3.
- ^ Henig, Robin Marantz (2006-08-13). "Fat Factors". New York Times Magazine. http://www.nytimes.com/2006/08/13/magazine/13obesity.html?pagewanted=3&ei=5070&en=0c39c5880e4d7067&ex=1166850000. Retrieved on 2008-09-28.
- ^ Ley RE, Bäckhed F, Turnbaugh P, Lozupone CA, Knight RD, Gordon JI (August 2005). "Obesity alters gut microbial ecology". Proc. Natl. Acad. Sci. U.S.A. 102 (31): 11070–5. doi:
- ^ Haakensen M, Dobson CM, Deneer H, Ziola B (July 2008). "Real-time PCR detection of bacteria belonging to the Firmicutes Phylum". Int. J. Food Microbiol. 125 (3): 236–41. doi:
Sources
- The text on this page is licensed under the GNU Free Documentation License. It includes material from Wikipedia retrieved Thursday, August 13, 2009.
- Photographs on this page are copyrighted by individual photographers, and individual copyrights apply.
- The GMapImageCutter is used under license from the UCL Centre for Advanced Spatial Analysis.
- The technology underlying this page, including the Image Browser and controls behind Keep Exploring, is owned by the BayScience Foundation. All rights are reserved.
